Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913162.1_cds_XP_016463221.1_56361
CDS Infomation

[gene=LOC107786282] [db_xref=GeneID:107786282] [protein=pheophytinase, chloroplastic-like] [protein_id=XP_016463221.1] [location=join(33687..34433,35591..35817,36154..36345,36443..36599,37077..37301)] [gbkey=CDS]
Sequence

ATGGAAATTATATCTTGCCATTCCACATCATTTTATTACGTTGTAAACGTTAGAGGGAAA
GCAACGGGTAAATGTCCAGGTTCAAATCAGGCAAGTTTTCCCATATTAAAAGAGGAAAGG
ATGTGTTATGTTCTATTTAAACCTTCTCGGGGAGCGCTCGGGTATTCTGGTGCAGATCAG
TTTAGCATAAAGAGACCAAATCGGAGCAGAATTTGTTGCCCTATCAATGCATTCAAGGAA
TTTGATAATTTTGATTCAAGTGCCTTGGGTAAAAGTTATAACTCTTATGCAGTTGATGGA
AAAGAGGGTAAGCAAGACGTGACTGGTGCTGGCAAATCAGTACCCAAGGTTATCATTCCT
GGTTTGCCCGACGAAGATAATAAAGGTGATTTGGGTGCTCCCATTAGCAGTTGGTTTTGG
GAATGGAAGCCAAAATTGAATGTTCATTATGAGAAATCAGGTTGCGAAAATGTTAATTCC
CCACCAGTGCTTTTTCTTCCTGGTTTTGGTGTTGGTTCCTTTCACTATGAAAAACAGCTA
AAGGATCTTGGCCGTGATCACAGAATATGGGCAATAGATTTTCTCGGCCAGGGGAAGTCA
TTACCATGTGAAGATCTGACCTCGACGTCCAAGGAACAACTTGACGGAGATGTGTGGGGC
TTTGGAGATGAAGCAAAACCCTGGGCAAAAGAACTTGTCTACTCTATTGACTTATGGAAG
GAGCAAGTGCACTATTTCATTGAAGAGGTTATTAAAGAGCCAGTTTACATTGTGGGGAAT
TCTCTTGGTGGGTATGTTGCCATTTACTTCGCAGCACGTTATCCTCATTTGGTTAAAGGT
GTAACTTTGCTGAACGCAACACCATTTTGGGGATTTTTTCCGAATCCTGTTAAATCCCCA
AGATTATCTAGAGTATTTCCCTGGACTGGGAGCTTTCCTCTTCCCACCTCTGTCAGAATG
CTCACAGAACTTCTATGGGAGAAAATTAGTGGTCCTGAATTTATTGCTAAGGTACTGAAA
CAAGTTTATGCTGATCACACCACAAAGTTTGATAAAGTTTTCACTCGGATACTTGAGACG
GCAAAACATCCTGCAGCAGCGGCAGCCTTTGCCTCAATAATGTTTGCTCCTAGAGGACAA
GTTTCTTTTGAAGAGGCTTTATCTGGGTGTCAAATGAAGAATGTGCCTGTCTGTCTCATG
TATGGGAAACAAGATCCATGGGTGAAGCCTATTTGGGGTTTACAGGTGAAACGGCAACTG
CCTGAAGCTCCATATTATGAGATTAGCCCTGCCGGCCATTGTCCCCATGATGAAGCTCCA
GAGGTCGTGAATTTTCTGCTCCGTGGATGGGTAAGGAGCTTAGAGTCCCATGGATCAGTT
GCATTGCCTCTGCTTGAAACTCCAGAAAATGTTGATTATGATGTTGCCAGAGACTTGGAT
TTTTCTCGTGAGGGGCTAAAAAGATCAGTGCAAGTGCAGTTTTATGGGTCAATGATTCCC
CATTGGAAGAGGGTTAGCGCGTACCTAAAAACTCAATTTCAAAATTGA

Peptide Sequence

PEP ID

XP_016463221.1
PEP Infomation

PREDICTED: pheophytinase, chloroplastic-like [Nicotiana tabacum]
Sequence

MEIISCHSTSFYYVVNVRGKATGKCPGSNQASFPILKEERMCYVLFKPSRGALGYSGADQ
FSIKRPNRSRICCPINAFKEFDNFDSSALGKSYNSYAVDGKEGKQDVTGAGKSVPKVIIP
GLPDEDNKGDLGAPISSWFWEWKPKLNVHYEKSGCENVNSPPVLFLPGFGVGSFHYEKQL
KDLGRDHRIWAIDFLGQGKSLPCEDLTSTSKEQLDGDVWGFGDEAKPWAKELVYSIDLWK
EQVHYFIEEVIKEPVYIVGNSLGGYVAIYFAARYPHLVKGVTLLNATPFWGFFPNPVKSP
RLSRVFPWTGSFPLPTSVRMLTELLWEKISGPEFIAKVLKQVYADHTTKFDKVFTRILET
AKHPAAAAAFASIMFAPRGQVSFEEALSGCQMKNVPVCLMYGKQDPWVKPIWGLQVKRQL
PEAPYYEISPAGHCPHDEAPEVVNFLLRGWVRSLESHGSVALPLLETPENVDYDVARDLD
FSREGLKRSVQVQFYGSMIPHWKRVSAYLKTQFQN

Transcript Sequence

Gene sequence data has not been registered.